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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18724957_18725836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18724957 - 18725836

Intron Length:

880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTTC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

AGTCTCCAAATG

Flanking Amino Acid:

SKALFPPEPQVLRDMCKQGY

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.8

79.1

30.7

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

67.2

0.39

0.8

59.8

29.8

Minor 5ss

35.8

-1.6

3.4

49.2

47.3

Minor BPS

43.5

-0.6

1.9

48.33

39.2

Associated Gene:

Gene:

PNPLA2

Ensembl Gene ID:

ENSAPLG00000013222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013794

18720009 - 18738172

18164