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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18754737_18755083_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18754737 - 18755083

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTGTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGGTGCTTTACT

Flanking Amino Acid:

LQPHGVTFQQEVQIWMPYAS

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

63.9

0.31

57.7

43.2

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

0.3

2.1

76.83

45.4

Associated Gene:

Gene:

PIDD1

Ensembl Gene ID:

ENSAPLG00000012991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020398

18749485 - 18764005

14521

ENSAPLT00000013549

18750241 - 18762207

11967