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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18755213_18755499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18755213 - 18755499

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCTAT

U12 Branch Point Sequence:

TCTTCTGTTACA

Flanking Amino Acid:

TQVEQETKSKKHVAHCRVLH

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

58.6

0.22

1.4

58.5

47.9

Major PPT

0.79

0.8

79.4

32.6

Minor 5ss

38.8

-1.3

2.8

48.8

Minor BPS

51.2

0.03

2.3

70.62

41.9

Associated Gene:

Gene:

PIDD1

Ensembl Gene ID:

ENSAPLG00000012991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020398

18749485 - 18764005

14521

ENSAPLT00000013549

18750241 - 18762207

11967