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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18756949_18757461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18756949 - 18757461

Intron Length:

513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGTTTCTTAATC

Flanking Amino Acid:

YAVFEVTHFSWYWLWYTTKT

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

67.6

0.4

1.1

60.6

44.8

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

81.1

0.96

82.67

30.6

Associated Gene:

Gene:

PIDD1

Ensembl Gene ID:

ENSAPLG00000012991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020398

18749485 - 18764005

14521

ENSAPLT00000013549

18750241 - 18762207

11967