Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_18799237_18800160_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18799237 - 18800160

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGCGTGTG

5'SS Class:

major

3'SS Sequence:

TGCTTCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAC

U12 Branch Point Sequence:

CCTTGCAGAGCA

Flanking Amino Acid:

KIQLQDAGRIAAQNKLMAAQ

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

65.1

40.8

Major BPS

45.3

-0.2

1.4

51.4

43.9

Major PPT

77.3

0.61

0.8

69.3

36.9

Minor 5ss

29.9

-2.3

3.4

36.5

43.1

Minor BPS

40.8

-0.7

2.2

52.88

45.1

Associated Gene:

Gene:

SLC25A22

Ensembl Gene ID:

ENSAPLG00000012816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013357

18784269 - 18802627

18359