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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18808214_18808520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18808214 - 18808520

Intron Length:

307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

CCGTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCGCGCTCACCC

Flanking Amino Acid:

VTSSDIEIFKAWAQASGRYE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

63.1

43.4

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

64.4

0.32

0.9

36.6

Minor 5ss

25.2

-2.8

3.2

43.1

Minor BPS

39.7

-0.8

2.1

43.22

44.4

Associated Gene:

Gene:

IRF7

Ensembl Gene ID:

ENSAPLG00000012752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036674

18807777 - 18810683

2907

ENSAPLT00000013271

18807929 - 18810885

2957