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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18808684_18808763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18808684 - 18808763

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACCC

Flanking Amino Acid:

DPHKVFAVTSAAPQHGQDTG

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

67.6

39.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

82.7

0.74

0.8

73.6

36.9

Minor 5ss

32.7

-2

39.6

45.9

Minor BPS

46.2

-0.3

1.9

51.61

45.6

Associated Gene:

Gene:

IRF7

Ensembl Gene ID:

ENSAPLG00000012752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013271

18807929 - 18810885

2957

ENSAPLT00000036674

18807777 - 18810683

2907