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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18808850_18808997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18808850 - 18808997

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGGG

5'SS Class:

major

3'SS Sequence:

CTTCCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAA

U12 Branch Point Sequence:

CTGTCAGTAAAG

Flanking Amino Acid:

PQQQPQQQPQLELNHHDVAP

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

49.8

46.9

Major BPS

55.1

0.13

1.2

57.3

36.3

Major PPT

85.8

0.8

0.7

80.2

Minor 5ss

33.1

-1.9

3.7

46.9

48.5

Minor BPS

44.5

-0.5

2.3

53.5

46.9

Associated Gene:

Gene:

IRF7

Ensembl Gene ID:

ENSAPLG00000012752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036674

18807777 - 18810683

2907

ENSAPLT00000013271

18807929 - 18810885

2957