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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18809560_18809669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18809560 - 18809669

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CGTGCTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAG

U12 Branch Point Sequence:

CGTGCTGTCACA

Flanking Amino Acid:

HMLLGEQTIPGAVPLPCHTH

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

57.3

0.18

1.7

57.1

49.4

Major PPT

67.5

0.39

40.5

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

42.8

-0.5

2.4

54.83

44.6

Associated Gene:

Gene:

IRF7

Ensembl Gene ID:

ENSAPLG00000012752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036674

18807777 - 18810683

2907

ENSAPLT00000013271

18807929 - 18810885

2957