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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18809796_18809862_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18809796 - 18809862

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTGTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGCTGCTGACCG

Flanking Amino Acid:

ASPAPPVDDTGIPPHLDVTI

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

73.4

0.53

0.9

68.1

37.4

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

-0.5

2.2

52.65

47.6

Associated Gene:

Gene:

IRF7

Ensembl Gene ID:

ENSAPLG00000012752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036674

18807777 - 18810683

2907

ENSAPLT00000013271

18807929 - 18810885

2957