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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18810238_18810381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18810238 - 18810381

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGCCAA

U12 Branch Point Sequence:

TCGCCCCGAAGC

Flanking Amino Acid:

SIFDFHRFCTDLRDFRDNRR

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.6

42.7

Major BPS

44.6

-0.3

1.2

48.2

36.6

Major PPT

86.2

0.81

0.8

80.4

31.5

Minor 5ss

30.2

-2.3

3.3

38.2

Minor BPS

-0.4

53.41

43.8

Associated Gene:

Gene:

IRF7

Ensembl Gene ID:

ENSAPLG00000012752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036674

18807777 - 18810683

2907

ENSAPLT00000013271

18807929 - 18810885

2957