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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18810501_18810738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18810501 - 18810738

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGACAC

U12 Branch Point Sequence:

GCCTGCAGGACA

Flanking Amino Acid:

PKESKLILVKLVPKFCEHWY

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

43.6

-0.4

1.1

44.2

38.7

Major PPT

80.7

0.69

0.8

73.4

37.1

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

41.3

-0.6

2.1

48.66

41.8

Associated Gene:

Gene:

IRF7

Ensembl Gene ID:

ENSAPLG00000012752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013271

18807929 - 18810885

2957