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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18825540_18826110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18825540 - 18826110

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCAGTTA

5'SS Class:

major

3'SS Sequence:

CTCTGTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATTTACATAACG

Flanking Amino Acid:

AEDLNQTLNQVFCQNLPLTP

Intron Amino Acid Position:

1506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

65.3

36.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

76.1

0.59

0.8

71.4

33.1

Minor 5ss

33.1

-1.9

3.6

46.3

Minor BPS

61.9

0.24

1.9

72.37

39.6

Associated Gene:

Gene:

PHRF1

Ensembl Gene ID:

ENSAPLG00000012427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012959

18820328 - 18845341

25014