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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18826188_18826873_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18826188 - 18826873

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

TTGGGGAACCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGGGAA

U12 Branch Point Sequence:

TCTTGGGGAACC

Flanking Amino Acid:

SGALSAGKAPRMPFYKLQRA

Intron Amino Acid Position:

1480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.3

76.2

39.9

Major BPS

42.9

-0.4

1.5

34.8

43.8

Major PPT

50.4

0.01

40.6

43.1

Minor 5ss

40.2

-1.1

37.2

Minor BPS

39.2

-0.8

2.8

58.45

46.5

Associated Gene:

Gene:

PHRF1

Ensembl Gene ID:

ENSAPLG00000012427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012959

18820328 - 18845341

25014