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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18830264_18832012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18830264 - 18832012

Intron Length:

1749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

CTGAAACATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

CCCCTCTGAAAC

Flanking Amino Acid:

VARPVSVGLPRSSVPALSPD

Intron Amino Acid Position:

495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

60.2

0.23

1.1

51.9

41.7

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

46.8

-0.2

1.6

49.16

40.9

Associated Gene:

Gene:

PHRF1

Ensembl Gene ID:

ENSAPLG00000012427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012959

18820328 - 18845341

25014