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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18834175_18834550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18834175 - 18834550

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCCCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAG

U12 Branch Point Sequence:

TGTGTCCCATCA

Flanking Amino Acid:

RAPARQKRKTGRRKKVAGKK

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

52.4

0.06

1.5

42.8

Major PPT

70.3

0.46

67.9

38.9

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

42.4

-0.5

2.1

56.68

42.4

Associated Gene:

Gene:

PHRF1

Ensembl Gene ID:

ENSAPLG00000012427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012959

18820328 - 18845341

25014