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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18834681_18836894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18834681 - 18836894

Intron Length:

2214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

ATCCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATCATCTAACT

Flanking Amino Acid:

NRITTAQQIQHVPRYLMSSL

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

68.4

0.41

0.8

58.6

32.3

Minor 5ss

41.2

-1

2.5

51.4

45.1

Minor BPS

54.5

0.22

1.8

76.88

38.8

Associated Gene:

Gene:

PHRF1

Ensembl Gene ID:

ENSAPLG00000012427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012959

18820328 - 18845341

25014