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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18837699_18840483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18837699 - 18840483

Intron Length:

2785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTTTGTTTGATT

Flanking Amino Acid:

RLLLCDGCDAGYHMECLNPP

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

71.6

40.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.1

0.68

79.5

32.8

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

60.4

0.41

1.8

78.01

39.5

Associated Gene:

Gene:

PHRF1

Ensembl Gene ID:

ENSAPLG00000012427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012959

18820328 - 18845341

25014