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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1898582_1899054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1898582 - 1899054

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTAACTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAGAT

U12 Branch Point Sequence:

TGATGCTTAACT

Flanking Amino Acid:

DDEAEEDEETEELGSDEDDI

Intron Amino Acid Position:

899

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

76.6

33.7

Major BPS

0.35

1.3

60.7

45.9

Major PPT

0.36

63.5

41.4

Minor 5ss

37.7

-1.4

3.1

47.6

48.1

Minor BPS

72.4

0.78

1.8

85.91

39.8

Associated Gene:

Gene:

IPO7

Ensembl Gene ID:

ENSAPLG00000016161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016896

1895942 - 1935877

39936