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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1899261_1899365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1899261 - 1899365

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GAATTCTTAATT

Flanking Amino Acid:

QWLNDVDCFLGLHDRKMCVL

Intron Amino Acid Position:

830

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

88.3

0.86

0.7

84.2

30.9

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

73.4

0.81

1.1

78.68

37.2

Associated Gene:

Gene:

IPO7

Ensembl Gene ID:

ENSAPLG00000016161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016896

1895942 - 1935877

39936