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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1900657_1902458_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1900657 - 1902458

Intron Length:

1802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

AATTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

ATGTCTTGAAAG

Flanking Amino Acid:

LEMIYSMCKKVLTGVAGEDA

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

76.9

0.67

66.3

40.4

Major PPT

81.4

0.71

0.9

77.9

40.2

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

55.4

0.03

1.6

41.7

Associated Gene:

Gene:

IPO7

Ensembl Gene ID:

ENSAPLG00000016161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016896

1895942 - 1935877

39936