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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19043731_19044549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19043731 - 19044549

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTCTAAATT

Flanking Amino Acid:

DKVKFTVHTKSSLPNFKQNE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.6

0.87

0.7

80.8

31.1

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

74.8

0.86

1.6

91.07

32.9

Associated Gene:

Gene:

SNX6

Ensembl Gene ID:

ENSAPLG00000011961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029633

19038645 - 19062820

24176