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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19049721_19051001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19049721 - 19051001

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

GATTTTGAGATT

Flanking Amino Acid:

ADGVIVSGVKDVDDFFEHER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

75.6

28.4

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

89.4

0.89

0.7

29.8

Minor 5ss

26.6

-2.7

31.4

42.8

Minor BPS

41.9

-0.5

2.1

58.91

39.2

Associated Gene:

Gene:

SNX6

Ensembl Gene ID:

ENSAPLG00000011961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029633

19038645 - 19062820

24176

ENSAPLT00000012478

19044550 - 19062178

17629