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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19053182_19054279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19053182 - 19054279

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATGTTTTTAAAT

Flanking Amino Acid:

KVSELFDKTRKIEARVSADE

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

35.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.8

0.71

0.9

73.1

41.5

Minor 5ss

47.3

-0.3

2.5

60.3

44.3

Minor BPS

68.3

0.65

1.3

78.91

37.3

Associated Gene:

Gene:

SNX6

Ensembl Gene ID:

ENSAPLG00000011961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029633

19038645 - 19062820

24176

ENSAPLT00000012478

19044550 - 19062178

17629