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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19054367_19055277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19054367 - 19055277

Intron Length:

911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

YYLRESQAAKDLLYRRSRSL

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

77.2

33.9

Major BPS

74.9

0.62

81.3

29.9

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

37.7

-1.4

48.7

47.5

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

SNX6

Ensembl Gene ID:

ENSAPLG00000011961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029633

19038645 - 19062820

24176

ENSAPLT00000012478

19044550 - 19062178

17629