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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19055438_19056493_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19055438 - 19056493

Intron Length:

1056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGGG

5'SS Class:

major

3'SS Sequence:

TTATTTTATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTTATA

Flanking Amino Acid:

FEKISESAKQELIDFKTRRV

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

61.6

43.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.8

0.78

0.9

80.8

35.7

Minor 5ss

38.2

-1.3

3.1

49.7

46.5

Minor BPS

60.3

0.32

1.8

75.84

35.2

Associated Gene:

Gene:

SNX6

Ensembl Gene ID:

ENSAPLG00000011961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029633

19038645 - 19062820

24176

ENSAPLT00000012478

19044550 - 19062178

17629