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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19056580_19062124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19056580 - 19062124

Intron Length:

5545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATTT

Flanking Amino Acid:

LAELELKHAKGNLQLLQSCL

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

76.2

39.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

88.8

0.87

0.7

84.1

30.7

Minor 5ss

41.8

-0.9

3.2

57.8

46.8

Minor BPS

75.8

0.89

1.5

91.23

32.5

Associated Gene:

Gene:

SNX6

Ensembl Gene ID:

ENSAPLG00000011961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029633

19038645 - 19062820

24176

ENSAPLT00000012478

19044550 - 19062178

17629