Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_19068571_19069902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19068571 - 19069902

Intron Length:

1332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCCAATTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

CCTTCTCCAATT

Flanking Amino Acid:

DQAWVDLQRRSYRNQRKGLR

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

71.7

0.49

0.9

65.6

34.6

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

49.3

0.03

1.9

68.25

43.4

Associated Gene:

Gene:

EAPP

Ensembl Gene ID:

ENSAPLG00000021600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046284

19064170 - 19071529

7360