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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1912344_1915282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1912344 - 1915282

Intron Length:

2939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GAGCTATTAATG

Flanking Amino Acid:

LKAFAVGVQQVLLKVLYQYK

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

76.8

0.6

0.9

69.3

41.6

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

47.8

-0.3

1.6

47.77

39.3

Associated Gene:

Gene:

IPO7

Ensembl Gene ID:

ENSAPLG00000016161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016896

1895942 - 1935877

39936