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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19157617_19159435_F

Intron Information:

Intron Rank:

135990

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19157617 - 19159435

Intron Length:

1819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCAACTGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GTTTTCTTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

48.1

-0.1

1.7

51.7

36.9

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

64.2

0.52

1.7

81.62

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047827

19156798 - 19159884

3087