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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19285571_19288320_F

Intron Information:

Intron Rank:

123873

Intron Class:

major

Intron Phase:

Intron Coordinates:

19285571 - 19288320

Intron Length:

2750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TTCTCTTACAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

69.2

0.48

37.1

Major PPT

89.4

0.89

0.8

29.4

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

45.5

-0.3

2.3

60.93

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026712

19266527 - 19288360

21834