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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19289653_19302650_F

Intron Information:

Intron Rank:

145973

Intron Class:

major

Intron Phase:

Intron Coordinates:

19289653 - 19302650

Intron Length:

12998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

GCATTCAGAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

87.9

29.3

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

86.6

0.82

0.7

84.2

23.8

Minor 5ss

45.7

-0.5

2.8

45.5

Minor BPS

47.1

-0.2

1.7

54.53

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022896

19289383 - 19306680

17298