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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19368553_19371386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19368553 - 19371386

Intron Length:

2834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAC

5'SS Class:

major

3'SS Sequence:

CCTTTTGCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GTTTGTTTCACT

Flanking Amino Acid:

DSESDSKDNSEDNENSKSDE

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

40.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

82.6

0.73

0.8

80.3

31.7

Minor 5ss

37.8

-1.4

3.1

50.8

45.8

Minor BPS

56.3

0.28

2.2

80.14

42.2

Associated Gene:

Gene:

NPAS3

Ensembl Gene ID:

ENSAPLG00000015085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030345

19367243 - 19936713

569471

ENSAPLT00000025088

19367243 - 19869513

502271

ENSAPLT00000015713

19367243 - 19834142

466900