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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19389681_19395794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19389681 - 19395794

Intron Length:

6114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACAGCTT

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

CCTTCTTGAATT

Flanking Amino Acid:

MDLNIIYCENRISDYMDLTP

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

66.9

44.1

Major BPS

74.6

0.61

65.6

41.4

Major PPT

89.8

0.9

0.6

89.2

19.6

Minor 5ss

-1.7

3.8

55.9

48.3

Minor BPS

65.6

0.57

1.4

76.06

41.4

Associated Gene:

Gene:

NPAS3

Ensembl Gene ID:

ENSAPLG00000015085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030345

19367243 - 19936713

569471

ENSAPLT00000025088

19367243 - 19869513

502271

ENSAPLT00000015713

19367243 - 19834142

466900