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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19485_21127_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19485 - 21127

Intron Length:

1643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAGCTTTCAATT

Flanking Amino Acid:

MNQLTPEDKKTFNFDVRQLH

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.4

0.66

0.9

74.5

39.5

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

1.4

60.7

37.2

Associated Gene:

Gene:

FAR1

Ensembl Gene ID:

ENSAPLG00000005107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037805

6668 - 51974

45307

ENSAPLT00000005315

16966 - 51974

35009