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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19671143_19790290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19671143 - 19790290

Intron Length:

119148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAATAA

5'SS Class:

major

3'SS Sequence:

GTTTTTTATTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATTC

Flanking Amino Acid:

EVCMRKTPCEVIGAQRRRSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

0.9

72.4

27.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.3

0.82

0.8

85.4

34.3

Minor 5ss

31.2

-2.2

3.1

37.8

Minor BPS

61.4

0.34

1.5

70.06

35.9

Associated Gene:

Gene:

NPAS3

Ensembl Gene ID:

ENSAPLG00000015085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025088

19367243 - 19869513

502271