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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19790342_19790453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19790342 - 19790453

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTGT

5'SS Class:

strong_major

3'SS Sequence:

AAATCCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

AATCCTTTAAAG

Flanking Amino Acid:

EGPPPNTSVKGIQMWKSEVC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

71.4

41.2

Major BPS

70.2

0.5

72.1

Major PPT

62.1

0.27

1.1

60.4

39.6

Minor 5ss

55.9

0.2

2.5

73.6

Minor BPS

61.3

0.22

1.5

62.16

39.1

Associated Gene:

Gene:

NPAS3

Ensembl Gene ID:

ENSAPLG00000015085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025088

19367243 - 19869513

502271