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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19790699_19892270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19790699 - 19892270

Intron Length:

101572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGTTGA

5'SS Class:

major

3'SS Sequence:

TTATTTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CTTTGTTTATTT

Flanking Amino Acid:

DGIYCESTYQNLQALRKEKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

70.4

36.3

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

90.1

0.9

0.7

89.2

27.5

Minor 5ss

47.4

-0.3

2.4

57.5

45.2

Minor BPS

53.5

0.19

74.81

43.2

Associated Gene:

Gene:

NPAS3

Ensembl Gene ID:

ENSAPLG00000015085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030345

19367243 - 19936713

569471