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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19892361_19907750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19892361 - 19907750

Intron Length:

15390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GATGCCTCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTGTTTTTGATG

Flanking Amino Acid:

GEYVKQLELMRITVQHPLPN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

70.5

0.46

61.8

39.7

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

56.3

0.05

1.3

56.5

40.4

Associated Gene:

Gene:

NPAS3

Ensembl Gene ID:

ENSAPLG00000015085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030345

19367243 - 19936713

569471