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Intron Name: Anas_platyrhynchos_platyrhynchos_5_19977339_19980859_F

Intron Information:

Intron Rank:

150299

Intron Class:

major

Intron Phase:

Intron Coordinates:

19977339 - 19980859

Intron Length:

3521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCGCAT

U12 Branch Point Sequence:

TTTTTTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

62.1

36.9

Major BPS

0.5

1.4

79.6

35.6

Major PPT

94.4

0.5

91.2

20.6

Minor 5ss

29.4

-2.4

3.1

36.1

35.8

Minor BPS

69.5

0.61

1.7

82.25

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039598

19974489 - 20026932

52444