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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20031389_20033003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

20031389 - 20033003

Intron Length:

1615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTATCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAC

U12 Branch Point Sequence:

TTGCCACTATCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

60.3

0.26

1.1

68.9

36.5

Major PPT

83.6

0.76

0.8

30.7

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

46.8

-0.1

2.2

71.78

44.4

Associated Gene:

Gene:

AKAP6

Ensembl Gene ID:

ENSAPLG00000015214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015858

20030437 - 20245427

214991

ENSAPLT00000018363

20030437 - 20245427

214991