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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2007542_2009163_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2007542 - 2009163

Intron Length:

1622

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCTATGAAA

5'SS Class:

weak_major

3'SS Sequence:

CTGGAGGTGCGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

ATTTCCTCAGCT

Flanking Amino Acid:

KRTGVSLEKVKETSSKKDLK

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.2

0.1

1.4

54.3

43.2

Major BPS

84.8

0.86

85.7

34.9

Major PPT

42.1

-0.4

1.7

34.4

45.1

Minor 5ss

19.4

-3.5

3.5

23.7

29.5

Minor BPS

68.1

0.65

1.8

87.25

Associated Gene:

Gene:

DENND5A

Ensembl Gene ID:

ENSAPLG00000002386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002450

1972822 - 2019189

46368