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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2011163_2011201_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2011163 - 2011201

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCAAG

5'SS Class:

major

3'SS Sequence:

GGATCTCGGTTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAGCAA

U12 Branch Point Sequence:

AGGTGCTGGATC

Flanking Amino Acid:

DVLSTGPASNKAVRIVLKQR

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

71.6

40.1

Major BPS

48.5

-0

1.4

38.9

Major PPT

52.1

0.05

1.1

51.1

43.7

Minor 5ss

40.4

-1.1

2.9

41.4

Minor BPS

45.8

-0.3

1.9

38.9

Associated Gene:

Gene:

DENND5A

Ensembl Gene ID:

ENSAPLG00000002386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002450

1972822 - 2019189

46368