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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_2011260_2014913_F

Intron Information:

Intron Rank:
10
Intron Class:
major-like
Intron Phase:
0
Intron Coordinates:
2011260 - 2014913
Intron Length:
3654

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TCA|GTATTTTCT
5'SS Class:
weak_major
3'SS Sequence:
TGTCCCAATACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
GTCTCAC
U12 Branch Point Sequence:
TTAGTCTCACTT
Flanking Amino Acid:
YCFSIKRTNSKYIQEARNLG
Intron Amino Acid Position:
706

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
59.4
0.22
1.1
61
38.3
Major BPS
67.3
0.43
1.2
71.3
36.7
Major PPT
69.8
0.45
1
62.7
37.5
Minor 5ss
54.3
0.14
2.3
73.5
36.5
Minor BPS
48.1
-0
1.9
68.16
43.3

Associated Gene:

Gene:
DENND5A
Ensembl Gene ID:
ENSAPLG00000002386
Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002450
1972822 - 2019189
46368