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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20113653_20165701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20113653 - 20165701

Intron Length:

52049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

TTTTCTTTCTCT

Flanking Amino Acid:

ENEEGTGSPKAEVQLCYLEA

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

0.1

59.7

32.6

Major PPT

87.5

0.84

0.6

81.5

30.5

Minor 5ss

-1.9

3.2

43.9

Minor BPS

47.9

-0

3.6

87.39

38.7

Associated Gene:

Gene:

AKAP6

Ensembl Gene ID:

ENSAPLG00000015214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018403

20033004 - 20247967

214964

ENSAPLT00000039623

20033004 - 20314761

281758

ENSAPLT00000018363

20030437 - 20245427

214991

ENSAPLT00000039319

20033004 - 20310614

277611

ENSAPLT00000015858

20030437 - 20245427

214991

ENSAPLT00000023757

20033045 - 20310614

277570

ENSAPLT00000019462

20033004 - 20326240

293237