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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20165866_20167146_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20165866 - 20167146

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCCT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTGGAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTCCCCTTCATT

Flanking Amino Acid:

LLELIVSHKSGLKDMLQMIA

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

77.8

36.9

Major BPS

73.1

0.58

79.6

29.1

Major PPT

54.3

0.1

1.2

42.2

Minor 5ss

36.2

-1.6

3.1

51.2

45.2

Minor BPS

65.1

0.56

1.8

81.08

41.1

Associated Gene:

Gene:

AKAP6

Ensembl Gene ID:

ENSAPLG00000015214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018363

20030437 - 20245427

214991

ENSAPLT00000039319

20033004 - 20310614

277611

ENSAPLT00000015858

20030437 - 20245427

214991

ENSAPLT00000023757

20033045 - 20310614

277570

ENSAPLT00000019462

20033004 - 20326240

293237

ENSAPLT00000018403

20033004 - 20247967

214964

ENSAPLT00000039623

20033004 - 20314761

281758