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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20167244_20180762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20167244 - 20180762

Intron Length:

13519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGACAA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

SLKLYLETHLSFKLNVDSHC

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

60.5

40.1

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

0.94

0.7

88.3

28.9

Minor 5ss

-2.3

3.3

35.1

42.5

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

AKAP6

Ensembl Gene ID:

ENSAPLG00000015214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018403

20033004 - 20247967

214964

ENSAPLT00000039623

20033004 - 20314761

281758

ENSAPLT00000018363

20030437 - 20245427

214991

ENSAPLT00000039319

20033004 - 20310614

277611

ENSAPLT00000015858

20030437 - 20245427

214991

ENSAPLT00000023757

20033045 - 20310614

277570

ENSAPLT00000019462

20033004 - 20326240

293237