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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20180886_20203204_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20180886 - 20203204

Intron Length:

22319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTTATCTGGTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATCT

Flanking Amino Acid:

NYETIWEKIEGFVSKLDEFI

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

57.5

0.17

1.2

63.8

41.8

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

79.8

1.01

1.4

95.48

31.1

Associated Gene:

Gene:

AKAP6

Ensembl Gene ID:

ENSAPLG00000015214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018403

20033004 - 20247967

214964

ENSAPLT00000039623

20033004 - 20314761

281758

ENSAPLT00000018363

20030437 - 20245427

214991

ENSAPLT00000039319

20033004 - 20310614

277611

ENSAPLT00000015858

20030437 - 20245427

214991

ENSAPLT00000023757

20033045 - 20310614

277570

ENSAPLT00000019462

20033004 - 20326240

293237