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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20209633_20245069_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20209633 - 20245069

Intron Length:

35437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TTTTCTATTACA

Flanking Amino Acid:

HVDVHLVQLKDICEDISDHV

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

38.1

Major BPS

75.1

0.62

65.6

Major PPT

0.9

0.7

84.9

28.3

Minor 5ss

38.2

-1.3

3.1

49.4

46.8

Minor BPS

62.6

0.39

1.9

80.4

34.9

Associated Gene:

Gene:

AKAP6

Ensembl Gene ID:

ENSAPLG00000015214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018363

20030437 - 20245427

214991

ENSAPLT00000039319

20033004 - 20310614

277611

ENSAPLT00000015858

20030437 - 20245427

214991

ENSAPLT00000023757

20033045 - 20310614

277570

ENSAPLT00000019462

20033004 - 20326240

293237

ENSAPLT00000018403

20033004 - 20247967

214964

ENSAPLT00000039623

20033004 - 20314761

281758