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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20245428_20306088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20245428 - 20306088

Intron Length:

60661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

75.4

34.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.8

0.83

0.7

81.6

30.3

Minor 5ss

33.5

-1.9

3.1

42.4

44.3

Minor BPS

67.7

0.63

1.6

82.72

39.3

Associated Gene:

Gene:

AKAP6

Ensembl Gene ID:

ENSAPLG00000015214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039319

20033004 - 20310614

277611

ENSAPLT00000023757

20033045 - 20310614

277570

ENSAPLT00000019462

20033004 - 20326240

293237

ENSAPLT00000039623

20033004 - 20314761

281758